Co-expression analysis

Gene ID Ta.50.1.S1_at
Gene name TaWIN1 protein
Homology with ArabidopsisSimilar to At3g02520: GRF7 (GENERAL REGULATORY FACTOR 7) (HF=1e-24)
Module size 6 genes
NF 0.43
%ile 67.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.98Ta.50.1.S1_atBJ307738TaWIN1 protein-1e-24At3g02520GRF7 (GENERAL REGULATORY FACTOR 7)O.I.H.G.S.X.
0.5072.40.99Ta.3097.1.S1_atCD937885--2e-7At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)O.I.H.G.S.X.
0.4666.80.98Ta.23771.1.S1_atCK211670--1e-35At1g22840CYTC-1 (CYTOCHROME C-1)O.I.H.G.S.X.
0.4058.40.99Ta.2848.1.S1_atBQ605815--1e-7At5g64350FKBP12 (FK506-BINDING PROTEIN)O.I.H.G.S.X.
0.2939.20.98Ta.23051.1.A1_a_atCK154103--4e-19At3g47930ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)O.I.H.G.S.X.
0.2633.60.98Ta.1902.2.S1_a_atCK209206--3e-4At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.699.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
10.999.3GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
9.799.1GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
9.399.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
8.298.8GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.994.0GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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