Co-expression analysis

Gene ID Ta.497.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g23660: transport protein, putative (HF=7e-8)
Module size 11 genes
NF 0.74
%ile 94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.87Ta.497.3.S1_atCA722566--7e-8At3g23660transport protein, putativeO.I.H.G.S.X.
0.8493.60.90Ta.11540.1.A1_atCK213912--5e+0At5g30490-O.I.H.G.S.X.
0.7891.10.90TaAffx.106672.1.S1_atCA713886--3e+0At4g25700BETA-OHASE 1 (BETA-HYDROXYLASE 1)O.I.H.G.S.X.
0.7891.10.94TaAffx.55852.1.S1_atCA660360--6e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.
0.7790.80.89TaAffx.119260.2.S1_atCA680043--1e+0At1g60815RALFL7 (RALF-LIKE 7)O.I.H.G.S.X.
0.7690.10.88TaAffx.28296.1.S1_atCA662099--2e+1At4g39540shikimate kinase family proteinO.I.H.G.S.X.
0.7690.10.93TaAffx.113686.2.S1_atCA607016--2e+1At3g56130biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.
0.7489.40.89TaAffx.29257.1.S1_atCA646899--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.5576.80.90TaAffx.52385.1.S1_atCA708316--4e+0At1g05930DNA bindingO.I.H.G.S.X.
0.5576.80.91TaAffx.8301.2.S1_s_atCA627623--5e-1At5g19875unknown proteinO.I.H.G.S.X.
0.5374.90.92TaAffx.112355.1.S1_atCA618883--4e+0At2g17080unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.598.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.498.2GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.497.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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