Co-expression analysis

Gene ID	Ta.4941.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g66110: metal ion binding (HF=5e-4)
Module size	6 genes
NF	0.17
%ile	30.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.5	0.77	Ta.4941.1.S1_at	BT009077.1	-	-	5e-4	At5g66110	metal ion binding	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.88	Ta.8032.2.A1_x_at	BQ161154	-	-	1e+1	At5g28610	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.83	Ta.18908.1.A1_at	CA643885	-	-	5e+0	At3g01327	-	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.78	TaAffx.119163.1.A1_at	BJ285786	-	-	4e+0	At2g05400	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.83	Ta.8032.1.S1_at	BJ252787	-	-	8e+0	At4g39330	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.83	Ta.9398.1.S1_a_at	CD452606	-	-	6e-20	At1g30330	ARF6 (AUXIN RESPONSE FACTOR 6)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.1	99.3	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
8.3	98.8	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.8	98.7	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.4	98.6	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.2	98.5	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.0	98.5	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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