Co-expression analysis

Gene ID	Ta.4869.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g01915: unknown protein (HF=2e+0)
Module size	9 genes
NF	0.24
%ile	40.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.97	Ta.4869.1.S1_at	BJ228959	-	-	2e+0	At4g01915	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.97	Ta.3797.3.S1_x_at	CA602105	-	-	2e+1	At5g11425	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.97	Ta.2982.1.S1_a_at	AY135021.1	GTP-binding protein	-	3e-37	At1g30580	GTP binding	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.18180.1.S1_x_at	CA614251	-	-	8e+0	At5g47520	AtRABA5a (Arabidopsis Rab GTPase homolog A5a)	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.97	TaAffx.12712.1.S1_at	BJ242590	-	-	5e+0	At1g48200	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.97	Ta.23804.1.S1_at	BJ215862	-	-	6e+0	At5g05010	clathrin adaptor complexes medium subunit-related	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.98	Ta.21252.3.S1_at	CA630645	-	-	1e+0	At2g45640	SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.97	Ta.27789.1.S1_x_at	CD920668	-	-	9e-35	At1g09640	elongation factor 1B-gamma, putative / eEF-1B gamma, putative	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.97	TaAffx.108368.1.S1_x_at	CA689117	-	-	2e-22	At1g14320	SAC52 (SUPPRESSOR OF ACAULIS 52)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	98.9	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.5	97.8	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM143505	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.5	95.4	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.3	95.0	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.1	94.5	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.1	94.5	GSM324489	Si- B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.9	94.0	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.9	94.0	GSM143520	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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