Co-expression analysis

Gene ID	Ta.4828.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g66190: FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1) (HF=2e-1)
Module size	6 genes
NF	0.81
%ile	97.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.96	Ta.4828.1.S1_a_at	BJ272492	-	-	2e-1	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.96	Ta.4828.3.S1_a_at	BJ267543	-	-	3e-1	At5g04800	40S ribosomal protein S17 (RPS17D)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.95	Ta.7667.1.S1_s_at	BJ268874	-	-	3e-1	At2g43620	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.97	Ta.4828.3.S1_x_at	BJ267543	-	-	3e-1	At5g04800	40S ribosomal protein S17 (RPS17D)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.9391.1.S1_at	BJ274623	-	-	1e+0	At2g21810	CHP-rich zinc finger protein, putative	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.96	TaAffx.15425.1.A1_at	BQ169160	-	-	1e+0	At1g13510	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.8	99.8	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
20.2	99.7	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
18.5	99.7	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
16.1	99.6	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.2	97.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.6	97.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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