Co-expression analysis

Gene ID Ta.4770.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At2g28105: - (HF=4e-1)
Module size 7 genes
NF 0.31
%ile 50.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.98Ta.4770.1.S1_x_atCK162188--4e-1At2g28105-O.I.H.G.S.X.
0.3651.90.98Ta.13180.2.S1_x_atBJ263702--2e-5At5g20165unknown proteinO.I.H.G.S.X.
0.3040.90.98Ta.5537.1.S1_atCD890152--2e-43At5g20570RBX1 (RING-BOX 1)O.I.H.G.S.X.
0.2939.20.98Ta.1087.1.S1_s_atCK169309--3e-5At3g25220FKBP15-1O.I.H.G.S.X.
0.2430.30.98Ta.21083.2.S1_atCA685996--5e-8At4g40100ABA-responsive protein-relatedO.I.H.G.S.X.
0.2430.30.98Ta.822.2.S1_x_atCD901100--1e-90At4g40040histone H3.2O.I.H.G.S.X.
0.1821.00.98Ta.16344.1.S1_atCK212005--3e-1At2g39320OTU-like cysteine protease family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.893.6GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.793.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.692.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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