Co-expression analysis

Gene ID	Ta.4770.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At2g28105: - (HF=4e-1)
Module size	7 genes
NF	0.31
%ile	50.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.9	0.98	Ta.4770.1.S1_x_at	CK162188	-	-	4e-1	At2g28105	-	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.98	Ta.13180.2.S1_x_at	BJ263702	-	-	2e-5	At5g20165	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.98	Ta.5537.1.S1_at	CD890152	-	-	2e-43	At5g20570	RBX1 (RING-BOX 1)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.1087.1.S1_s_at	CK169309	-	-	3e-5	At3g25220	FKBP15-1	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.98	Ta.21083.2.S1_at	CA685996	-	-	5e-8	At4g40100	ABA-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.98	Ta.822.2.S1_x_at	CD901100	-	-	1e-90	At4g40040	histone H3.2	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.98	Ta.16344.1.S1_at	CK212005	-	-	3e-1	At2g39320	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7	93.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
2.6	92.9	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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