Co-expression analysis

Gene ID	Ta.4745.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g59860: RNA recognition motif (RRM)-containing protein (HF=3e+0)
Module size	9 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.2	0.93	Ta.4745.1.S1_at	BJ270947	-	-	3e+0	At5g59860	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.95	Ta.25205.1.A1_at	CD454715	-	-	3e-1	At5g10430	AGP4 (ARABINOGALACTAN PROTEIN 4)	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.94	Ta.3768.1.A1_at	BJ253616	-	-	1e-1	At1g03020	glutaredoxin family protein	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.94	Ta.28843.1.A1_at	BQ169554	-	-	3e+0	At5g63460	SAP domain-containing protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.95	Ta.6399.1.A1_at	BJ263740	-	-	5e+0	At5g49490	AGL83 (AGAMOUS-LIKE 83)	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.94	TaAffx.118768.1.A1_at	BJ310103	-	-	1e+0	At5g09225	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.94	Ta.6440.1.A1_at	BJ311244	-	-	1e+0	At4g09860	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	Ta.26985.1.S1_at	CD454201	-	-	6e+0	At5g53200	TRY (TRIPTYCHON)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.95	Ta.12263.1.A1_at	BQ171969	-	-	3e+0	At3g30725	AtGDU6 (Arabidopsis thaliana GLUTAMINE DUMPER 6)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	99.2	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
8.9	99.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.8	98.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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