Co-expression analysis

Gene ID	Ta.4729.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g01150: PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1) (HF=1e-27)
Module size	6 genes
NF	0.44
%ile	69.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	58.4	0.98	Ta.4729.1.S1_at	BJ273107	-	-	1e-27	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.98	Ta.11728.1.S1_at	BQ170684	-	-	2e-3	At1g10310	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.21919.1.A1_at	CA708737	-	-	4e-4	At3g26850	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.22731.1.S1_a_at	BJ276668	-	-	9e-9	At5g55510	P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	TaAffx.35707.1.S1_at	CA705245	-	-	7e-13	At5g63000	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.98	Ta.2803.1.S1_at	BJ322551	-	-	1e+0	At5g46030	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.1	99.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.1	99.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7	98.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.5	98.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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