Co-expression analysis

Gene ID Ta.4580.2.S1_a_at
Gene name calcium-dependent protein kinase
Homology with ArabidopsisSimilar to At5g12480: CPK7 (calmodulin-domain protein kinase 7) (HF=8e-14)
Module size 7 genes
NF 0.52
%ile 78.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4362.20.92Ta.4580.2.S1_a_atBJ268280calcium-dependent protein kinase-8e-14At5g12480CPK7 (calmodulin-domain protein kinase 7)O.I.H.G.S.X.
0.5779.20.94Ta.4189.2.S1_a_atCA626707--3e-1At1g12990glycosyl transferase family 17 proteinO.I.H.G.S.X.
0.5374.90.93Ta.22757.1.S1_s_atCK211700--1e-4At1g11700unknown proteinO.I.H.G.S.X.
0.5072.40.95Ta.4189.1.S1_atCK154928--1e-6At5g14480glycosyl transferase family 17 proteinO.I.H.G.S.X.
0.4666.80.94Ta.28276.2.S1_x_atAJ613933--2e+0At1g29000heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.4666.80.94Ta.4189.2.S1_x_atCA626707--3e-1At1g12990glycosyl transferase family 17 proteinO.I.H.G.S.X.
0.4464.50.93Ta.16082.2.S1_atCK211295--2e+0At2g32100OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.8GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.598.3GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
6.398.2GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
6.098.0GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.797.1GSM143523Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.596.9GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.296.6GSM324485Si- B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.296.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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