Co-expression analysis

Gene ID	Ta.4491.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g63680: MURE (HF=5e-2)
Module size	6 genes
NF	0.65
%ile	89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.2	0.96	Ta.4491.1.S1_at	BJ267128	-	-	5e-2	At1g63680	MURE	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.97	TaAffx.93362.1.S1_at	BJ221573	-	-	2e-2	At3g43340	-	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.12004.1.A1_at	BQ171246	-	-	4e+0	At3g18990	VRN1 (REDUCED VERNALIZATION RESPONSE 1)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.819.1.A1_at	BE399396	-	-	1e+0	At2g43480	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	TaAffx.59073.1.S1_at	CA608581	-	-	4e+0	At5g16090	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	TaAffx.59073.1.S1_x_at	CA608581	-	-	4e+0	At5g16090	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	98.7	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.9	97.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.3	95.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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