Co-expression analysis

Gene ID Ta.4482.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g18690: unknown protein (HF=6e-4)
Module size 43 genes
NF 0.33
%ile 53.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9899.90.94Ta.4482.1.S1_atBJ267004--6e-4At4g18690unknown proteinO.I.H.G.S.X.
0.5979.80.97Ta.7397.1.A1_s_atBJ216861--7e+0At5g19315-O.I.H.G.S.X.
0.5879.20.96TaAffx.64203.1.A1_atBJ311015--7e-2At4g30630unknown proteinO.I.H.G.S.X.
0.5374.90.97Ta.5816.1.A1_s_atBJ290210--8e-1At4g22350ubiquitin carboxyl-terminal hydrolase family proteinO.I.H.G.S.X.
0.4969.70.97Ta.11653.1.A1_atBQ170533--7e-1At3g10570CYP77A6O.I.H.G.S.X.
0.4969.70.96Ta.28820.2.A1_atCA639788--1e+0At2g03130ribosomal protein L12 family proteinO.I.H.G.S.X.
0.4869.00.96Ta.18864.1.S1_atCA643239--1e-1At1g18530calmodulin, putativeO.I.H.G.S.X.
0.4767.90.94Ta.4733.1.A1_s_atBJ275779--4e-2At5g50090unknown proteinO.I.H.G.S.X.
0.4767.90.96Ta.26024.1.A1_s_atCD454705--2e+0At1g27310NTF2A (NUCLEAR TRANSPORT FACTOR 2A)O.I.H.G.S.X.
0.4767.90.97Ta.7305.2.S1_a_atCA616696--4e+0At5g62740band 7 family proteinO.I.H.G.S.X.
0.4464.50.96TaAffx.37141.1.A1_atBJ298805--7e-2At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.4159.60.98Ta.20444.2.S1_atBJ312208--1e+0At1g07985Expressed proteinO.I.H.G.S.X.
0.4058.40.97Ta.6804.1.S1_atCN009384--3e+0At2g37200integral membrane protein, putativeO.I.H.G.S.X.
0.3956.10.97Ta.19823.1.A1_atCA659853--4e+0At4g34680GATA transcription factor 3, putative (GATA-3)O.I.H.G.S.X.
0.3956.10.96Ta.30893.1.A1_atCN011782--4e+0At3g33187-O.I.H.G.S.X.
0.3854.70.96Ta.3762.1.S1_atBJ251431--3e-12At3g46960ATP binding / ATP-dependent helicase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid bindingO.I.H.G.S.X.
0.3854.70.96Ta.11192.1.A1_atCD908993--5e-1At4g15300CYP702A2O.I.H.G.S.X.
0.3651.90.95Ta.18536.1.A1_atCA638481--3e-1At5g36900unknown proteinO.I.H.G.S.X.
0.3651.90.96Ta.8980.1.S1_atCK155123--4e-2At5g39570unknown proteinO.I.H.G.S.X.
0.3549.80.97Ta.7626.1.A1_atCK151773--5e-11At4g00660DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.3448.10.97Ta.12354.1.S1_a_atBQ172174--1e-8At4g38390unknown proteinO.I.H.G.S.X.
0.3448.10.97Ta.13908.1.S1_atBQ172050--7e-1At4g36280ATP-binding region, ATPase-like domain-containing proteinO.I.H.G.S.X.
0.3448.10.97Ta.6457.1.A1_atCD901992--3e-1At4g14145unknown proteinO.I.H.G.S.X.
0.3244.40.96Ta.3082.2.A1_a_atBJ215607--4e+0At3g61990O-methyltransferase family 3 proteinO.I.H.G.S.X.
0.3244.40.96Ta.5583.1.S1_atBE419808--4e-1At2g31230ATERF15 (Ethylene-responsive element binding factor 15)O.I.H.G.S.X.
0.2939.20.96Ta.2988.3.A1_atBJ226941--5e+0At1g67980CCoAMTO.I.H.G.S.X.
0.2939.20.95TaAffx.113963.1.S1_atBJ219694--1e-3At1g31870unknown proteinO.I.H.G.S.X.
0.2939.20.96Ta.8127.1.S1_atBE443085--6e-7At5g16870aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.2939.20.97Ta.6513.1.S1_atBJ301165--2e-28At2g38770EMB2765 (EMBRYO DEFECTIVE 2765)O.I.H.G.S.X.
0.2735.60.97Ta.28962.1.S1_atCK157144--1e-30At1g06220MEE5 (MATERNAL EFFECT EMBRYO ARREST 5)O.I.H.G.S.X.
0.2735.60.96Ta.2850.1.S1_atBQ487328--3e-4At1g47290AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1)O.I.H.G.S.X.
0.2633.60.96TaAffx.48415.1.S1_atBJ271951--1e+0At5g57510unknown proteinO.I.H.G.S.X.
0.2532.10.96Ta.3399.1.S1_atBJ211211--6e+0At1g02940GSTF5 (GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5)O.I.H.G.S.X.
0.2532.10.97Ta.5910.1.S1_atBJ291908--5e+0At3g28350-O.I.H.G.S.X.
0.2430.30.96Ta.16022.1.S1_atCA595226--5e+0At5g63440unknown proteinO.I.H.G.S.X.
0.2430.30.96Ta.12500.1.A1_x_atBQ172023--5e-3At3g06300AT-P4H-2 (A. THALIANA P4H ISOFORM 2)O.I.H.G.S.X.
0.2329.00.96Ta.15.1.S1_atCD453965TATA binding protein (TFIID)-3e-27At1g55520TBP2 (TATA BINDING PROTEIN 2)O.I.H.G.S.X.
0.2227.10.97Ta.6563.1.A1_atBJ263201--3e-8At2g06990HEN2 (hua enhancer 2)O.I.H.G.S.X.
0.2125.50.97Ta.9249.2.S1_x_atBE420360--5e+0At2g36170ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A)O.I.H.G.S.X.
0.2125.50.97Ta.4166.2.A1_atBJ265813--5e-9At3g44600CYP71 (CYCLOPHILIN71)O.I.H.G.S.X.
0.1821.00.96Ta.27987.1.S1_atCD927641--2e+0At2g01100unknown proteinO.I.H.G.S.X.
0.1719.80.97Ta.5831.1.S1_atBJ249812--2e-2At2g13540ABH1 (ABA HYPERSENSITIVE 1)O.I.H.G.S.X.
0.1314.60.96Ta.6070.1.S1_atBT009284.1--7e-2At5g56360calmodulin-binding proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.797.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.595.4GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.994.0GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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