Co-expression analysis

Gene ID Ta.4287.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g55870: anthranilate synthase, alpha subunit, putative (HF=2e-8)
Module size 6 genes
NF 0.40
%ile 63.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.89Ta.4287.1.S1_atBQ161159--2e-8At3g55870anthranilate synthase, alpha subunit, putativeO.I.H.G.S.X.
0.7790.80.90TaAffx.64763.1.S1_atBJ282605--6e+0At4g13100zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6081.00.91Ta.25629.1.S1_atCD373595--2e-1At3g28200peroxidase, putativeO.I.H.G.S.X.
0.5779.20.91Ta.14141.1.A1_atBE443910--4e+0At1g44890unknown proteinO.I.H.G.S.X.
0.5072.40.95Ta.6340.1.S1_atBJ308386--1e+0At2g34280S locus F-box-related / SLF-relatedO.I.H.G.S.X.
0.1112.40.90TaAffx.31537.1.S1_atCA613681--1e+0At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.899.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
10.499.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.897.9GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.997.3GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.596.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.396.7GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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