Co-expression analysis

Gene ID Ta.4256.1.S1_at
Gene name Sucrose-phosphate synthase 2
Homology with ArabidopsisSimilar to At5g20280: ATSPS1F (sucrose phosphate synthase 1F) (HF=1e-13)
Module size 11 genes
NF 0.10
%ile 21.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.93Ta.4256.1.S1_atCD910522Sucrose-phosphate synthase 2-1e-13At5g20280ATSPS1F (sucrose phosphate synthase 1F)O.I.H.G.S.X.
0.1922.40.96Ta.25500.1.S1_atCD490591--9e-16At5g20540ATBRXL4 (BREVIS RADIX-LIKE 4)O.I.H.G.S.X.
0.1922.40.96TaAffx.143995.9.S1_s_atAF434705--2e-1At3g28050nodulin MtN21 family proteinO.I.H.G.S.X.
0.1719.80.94Ta.20537.1.S1_x_atCA648311--5e-4At3g53340NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)O.I.H.G.S.X.
0.1517.10.94TaAffx.3105.1.S1_atCD897248--2e-1At3g61500unknown proteinO.I.H.G.S.X.
0.1314.60.97TaAffx.2433.1.S1_atCA601863--4e+0At1g04190tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.0910.40.96TaAffx.38567.1.A1_atCK208365--1e+0At3g01550PPT2 (PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2)O.I.H.G.S.X.
0.078.60.94Ta.5415.1.A1_atBE516198--8e-2At1g21990F-box family proteinO.I.H.G.S.X.
0.067.60.96TaAffx.130819.1.A1_atBG607589--4e-9At3g02290zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.056.70.95Ta.3207.2.S1_a_atCD889824--4e-5At5g08080SYP132 (SYNTAXIN OF PLANTS 132)O.I.H.G.S.X.
0.023.60.95Ta.1089.1.S1_a_atBQ842113--2e-3At2g06010ORG4 (OBP3-RESPONSIVE GENE 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.099.7GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
10.899.2GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
9.099.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.198.5GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.498.2GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.098.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.197.5GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.596.9GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.596.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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