Co-expression analysis

Gene ID	Ta.4255.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g75690: chaperone protein dnaJ-related (HF=4e-3)
Module size	6 genes
NF	0.72
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.4255.2.S1_x_at	CA627750	-	-	4e-3	At1g75690	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.96	Ta.4255.2.S1_at	CA627750	-	-	4e-3	At1g75690	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.4255.1.S1_x_at	BE591014	-	-	7e-3	At1g75690	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.581.2.S1_a_at	CD862705	hypothetical LOC543355	-	9e-3	At2g35370	GDCH	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.22596.1.S1_at	CA626055	-	-	9e+0	At5g32597	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.98	Ta.581.1.S1_at	AY123417.1	hypothetical LOC543355	-	1e-7	At1g32470	glycine cleavage system H protein, mitochondrial, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.3	99.8	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
18.5	99.7	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
16.9	99.6	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
8.9	99.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.7	98.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0	98.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.6	98.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.1	98.1	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage