Co-expression analysis

Gene ID Ta.424.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g02370: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.60
%ile 85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3244.40.89Ta.424.1.S1_atCA644335--5e+0At4g02370unknown proteinO.I.H.G.S.X.
0.8393.40.90Ta.11016.1.S1_atBQ168385--2e+0At2g27030CAM5 (CALMODULIN 5)O.I.H.G.S.X.
0.7389.10.93TaAffx.26308.1.S1_atCA690131--6e-2At5g28610-O.I.H.G.S.X.
0.7389.10.93Ta.8512.2.S1_x_atBQ281568--5e+0At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.
0.6786.30.95TaAffx.54566.1.S1_s_atCA679969--8e-1At2g27030CAM5 (CALMODULIN 5)O.I.H.G.S.X.
0.5072.40.92Ta.8512.1.S1_atBQ162001--7e+0At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.999.8GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
22.699.8GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
20.199.7GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.698.7GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.097.4GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.695.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.294.8GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.094.3GSM143510Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.692.9GSM139915Anther pre-meiosis rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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