Co-expression analysis

Gene ID Ta.4185.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g10440: dehydration-responsive family protein (HF=3e-4)
Module size 6 genes
NF 0.29
%ile 47.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.92Ta.4185.2.S1_atBJ260400--3e-4At4g10440dehydration-responsive family proteinO.I.H.G.S.X.
0.3549.80.93Ta.8631.2.S1_a_atCA635564--5e-9At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.3346.90.91TaAffx.84729.1.S1_atCA630325--3e-1At1g10210ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)O.I.H.G.S.X.
0.2329.00.92Ta.3932.1.S1_a_atCA685040--2e+1At5g23510unknown proteinO.I.H.G.S.X.
0.2227.10.94Ta.8433.2.S1_a_atCA645972--1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.H.G.S.X.
0.1719.80.92Ta.17648.1.S1_s_atCA623067--4e-20At2g46700calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.199.8GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
23.699.8GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
19.599.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
14.899.5GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
13.099.4GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
12.599.4GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.492.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
1.988.9GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
1.988.9GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
1.888.1GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1612756_at, orthologous to the query gene, Ta.4185.2.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.91612756_atAt4g10440hypothetical protein LOC100258541-1e-45At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.3751.71608299_atAt4g10440hypothetical protein LOC100264505-2e-21At2g19520FVEO.I.H.G.S.X.
0.3650.71615029_atAt4g10440--3e-34At1g57720elongation factor 1B-gamma, putative / eEF-1B gamma, putativeO.I.H.G.S.X.
0.3446.81621111_atAt4g10440hypothetical protein LOC100254821-2e+0At4g33145unknown proteinO.I.H.G.S.X.
0.3039.41613455_atAt4g10440--5e-69At4g34570THY-2 (thymidylate synthase 2)O.I.H.G.S.X.
0.3039.41622817_atAt4g10440hypothetical protein LOC100251895-4e-42At2g40660tRNA-binding region domain-containing proteinO.I.H.G.S.X.
0.3039.41613765_atAt4g10440hypothetical protein LOC100262312-1e-3At3g48750CDC2 (CELL DIVISION CONTROL 2)O.I.H.G.S.X.
0.2837.71614845_atAt4g10440hypothetical protein LOC100262902-1e+0At1g65900unknown proteinO.I.H.G.S.X.
0.2428.71616265_s_atAt4g10440--4e-20At3g05060SAR DNA-binding protein, putativeO.I.H.G.S.X.
0.2225.61606984_atAt4g10440hypothetical protein LOC100251815-8e-34At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.
0.1718.21622390_atAt4g10440--2e-2At5g17410tubulin family proteinO.I.H.G.S.X.
0.1616.71608111_atAt4g10440hypothetical protein LOC100247823-1e+0At1g24240ribosomal protein L19 family proteinO.I.H.G.S.X.
0.1414.41618999_atAt4g10440hypothetical protein LOC100262446-1e-21At4g02030-O.I.H.G.S.X.
0.1313.31619979_atAt4g10440hypothetical protein LOC100243832-3e-1At4g25280adenylate kinase family proteinO.I.H.G.S.X.
0.1212.11621149_atAt4g10440similar to 60S ribosomal protein L19-3e-79At1g02780emb2386 (embryo defective 2386)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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