Co-expression analysis

Gene ID	Ta.4105.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g37470: histone H2B, putative (HF=1e+0)
Module size	8 genes
NF	0.69
%ile	91.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	56.1	0.87	Ta.4105.1.S1_at	BJ258955	-	-	1e+0	At2g37470	histone H2B, putative	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.94	Ta.9046.2.S1_a_at	CA628927	-	-	1e+0	At5g62930	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.94	TaAffx.59301.1.S1_at	AJ603987	-	-	6e-1	At5g62250	MAP65-9 (MICROTUBULE-ASSOCIATED PROTEIN 65-9)	O.I.	H.G.	S.X.	Please select
0.78	91.1	0.89	Ta.5383.1.A1_at	BQ170174	-	-	6e+0	At2g33847	unknown protein	O.I.	H.G.	S.X.	Please select
0.78	91.1	0.92	Ta.18731.1.S1_a_at	CD491978	-	-	2e+0	At3g60840	MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.94	Ta.9046.1.S1_at	CK166079	-	-	3e+0	At5g62930	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.93	Ta.4087.1.S1_at	BJ264637	-	-	1e+0	At4g33640	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.94	TaAffx.9221.1.S1_at	CK208355	-	-	3e-1	At5g23030	TET12 (TETRASPANIN12)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.3	99.8	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
16.2	99.6	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
14.6	99.5	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
12.2	99.4	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
9.7	99.1	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
8.9	99.0	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.1	98.1	GSM246395	SB69_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
5.8	97.9	GSM314267	tissue type: seedling, leaf - rep2	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7	97.1	GSM314268	tissue type: seedling, leaf - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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