Co-expression analysis

Gene ID Ta.408.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g32950: subtilase family protein (HF=7e-3)
Module size 7 genes
NF 0.59
%ile 85.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.00.92Ta.408.3.S1_atBG906873--7e-3At1g32950subtilase family proteinO.I.H.G.S.X.
0.6081.00.89Ta.408.2.S1_atBG909972--4e+0At5g22040-O.I.H.G.S.X.
0.6081.00.89Ta.408.1.A1_atBG905348--2e+0At1g06500unknown proteinO.I.H.G.S.X.
0.6081.00.91TaAffx.32049.1.S1_atCA602314--1e+0At1g32980subtilisin-like serine protease-relatedO.I.H.G.S.X.
0.4464.50.93Ta.27457.4.S1_x_atBJ254483--2e-2At5g02380MT2B (METALLOTHIONEIN 2B)O.I.H.G.S.X.
0.4464.50.94Ta.27457.6.S1_x_atBJ286831--1e-4At5g02380MT2B (METALLOTHIONEIN 2B)O.I.H.G.S.X.
0.4058.40.93Ta.27457.8.S1_x_atBJ264173--6e-12At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.399.5GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.099.4GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.899.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.998.4GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.698.3GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.098.0GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.998.0GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.797.9GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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