Co-expression analysis

Gene ID	Ta.4052.2.A1_a_at
Gene name
Homology with Arabidopsis	Similar to At1g57610: unknown protein (HF=1e+0)
Module size	9 genes
NF	0.62
%ile	87.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.94	Ta.4052.2.A1_a_at	BJ213636	-	-	1e+0	At1g57610	unknown protein	O.I.	H.G.	S.X.	Please select
0.89	94.6	0.95	Ta.9391.2.S1_a_at	CA596737	-	-	1e+0	At1g17130	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.94	Ta.484.2.S1_x_at	CK209078	-	-	2e-1	At5g24490	30S ribosomal protein, putative	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.95	Ta.17247.1.A1_a_at	BJ274878	-	-	1e+0	At4g19550	transcription regulator/ zinc ion binding	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.96	Ta.484.1.S1_at	BJ322416	-	-	3e+0	At5g54150	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.95	Ta.4052.1.A1_a_at	BJ263212	-	-	2e+0	At1g57610	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.8965.2.S1_x_at	BQ162698	-	-	1e-1	At3g53850	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	Ta.8872.1.S1_at	BQ162544	-	-	5e+0	At3g14760	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	Ta.4828.1.S1_a_at	BJ272492	-	-	2e-1	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.9	99.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
15.9	99.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
14.7	99.5	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
14.2	99.5	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
13.7	99.5	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
13.2	99.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
12.6	99.4	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
12.4	99.4	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.2	99.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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