Co-expression analysis

Gene ID	Ta.4001.1.S1_at
Gene name	phosphate transporter 2-1
Homology with Arabidopsis	Similar to At3g26570: PHT2 (HF=6e-12)
Module size	8 genes
NF	0.71
%ile	93.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.38	54.7	0.98	Ta.4001.1.S1_at	AY293827.1	phosphate transporter 2-1	-	6e-12	At3g26570	PHT2	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.98	Ta.881.1.S1_a_at	CK213344	-	-	9e+0	At4g24974	-	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.98	Ta.881.2.S1_x_at	CA672612	-	-	2e-2	At1g45474	LHCA5	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.99	Ta.881.2.S1_at	CA672612	-	-	2e-2	At1g45474	LHCA5	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.98	Ta.881.1.S1_at	CK213344	-	-	9e+0	At4g24974	-	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.98	Ta.7769.1.A1_at	BQ171706	-	-	1e-8	At1g71500	Rieske (2Fe-2S) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.98	Ta.881.2.S1_a_at	CA672612	-	-	2e-2	At1g45474	LHCA5	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	Ta.504.1.A1_at	BQ161199	-	-	4e-1	At5g52030	TraB protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.8	96.0	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.8	96.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.7	95.8	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.6	95.6	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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