Co-expression analysis

Gene ID Ta.3942.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At4g23650: CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) (HF=3e-9)
Module size 6 genes
NF 0.44
%ile 69.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.96Ta.3942.1.S1_a_atBJ255487--3e-9At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.3854.70.96Ta.22715.2.A1_atCD873981--3e-12At2g20840secretory carrier membrane protein (SCAMP) family proteinO.I.H.G.S.X.
0.3854.70.96Ta.6101.1.S1_atCD937323--2e-10At3g48890ATMP2O.I.H.G.S.X.
0.3651.90.96Ta.9033.1.S1_atBQ162796--2e-6At5g07910leucine-rich repeat family proteinO.I.H.G.S.X.
0.3651.90.96TaAffx.24848.1.S1_atBJ306162--2e+0At2g30350endo/excinuclease amino terminal domain-containing proteinO.I.H.G.S.X.
0.2939.20.97Ta.24202.1.S1_s_atCA693707--7e+0At4g33640unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.799.8GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
19.899.7GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
17.699.7GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
14.599.5GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
14.299.5GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.599.2GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.698.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.898.7GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.598.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.598.6GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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