Co-expression analysis

Gene ID Ta.3938.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g19450: integral membrane protein, putative / sugar transporter family protein (HF=9e-3)
Module size 39 genes
NF 0.41
%ile 66.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8894.40.93Ta.3938.2.S1_atCD931721--9e-3At1g19450integral membrane protein, putative / sugar transporter family proteinO.I.H.G.S.X.
0.5374.90.95Ta.9064.2.S1_s_atBJ274048--4e+0At3g54340AP3 (APETALA 3)O.I.H.G.S.X.
0.5374.90.95TaAffx.12850.1.S1_x_atCD920481--7e-1At3g16250NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)O.I.H.G.S.X.
0.5173.00.96TaAffx.12850.2.S1_x_atCA713552--4e+0At2g24400auxin-responsive protein, putative / small auxin up RNA (SAUR_D)O.I.H.G.S.X.
0.5072.40.94TaAffx.12850.1.S1_atCD920481--7e-1At3g16250NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)O.I.H.G.S.X.
0.4969.70.94Ta.9064.1.S1_x_atCK196305--2e+0At5g64380fructose-1,6-bisphosphatase family proteinO.I.H.G.S.X.
0.4767.90.94TaAffx.37480.1.S1_atCD935439--1e+0At2g27580zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.4666.80.96Ta.2870.2.S1_atBJ284170--3e-31At3g17820ATGSKB6O.I.H.G.S.X.
0.4565.20.95Ta.11120.1.S1_x_atBJ264528--1e-6At1g12240ATBETAFRUCT4O.I.H.G.S.X.
0.4565.20.95Ta.11120.2.S1_x_atCA630507--1e+0At5g03400unknown proteinO.I.H.G.S.X.
0.4565.20.95Ta.9973.1.S1_atBJ237646--2e+0At1g12080unknown proteinO.I.H.G.S.X.
0.4464.50.94Ta.22430.1.S1_atCA745538--2e+0At5g0296040S ribosomal protein S23 (RPS23B)O.I.H.G.S.X.
0.4362.20.95Ta.5667.1.S1_atCD454421--7e-1At4g38781unknown proteinO.I.H.G.S.X.
0.4362.20.95Ta.11120.1.S1_a_atBJ264528--1e-6At1g12240ATBETAFRUCT4O.I.H.G.S.X.
0.4362.20.95Ta.10964.1.A1_atBQ166916--1e+0At1g69320CLE10 (CLAVATA3/ESR-RELATED 10)O.I.H.G.S.X.
0.4260.90.96Ta.1316.2.S1_x_atCA647764--2e+0At1g09740ethylene-responsive protein, putativeO.I.H.G.S.X.
0.4159.60.96Ta.27776.1.S1_atBJ274612MADS-box transcription factor TaAGL2-3e-12At4g18960AG (AGAMOUS)O.I.H.G.S.X.
0.4159.60.95Ta.28600.1.S1_a_atBE443069--2e-9At3g45010scpl48 (serine carboxypeptidase-like 48)O.I.H.G.S.X.
0.4159.60.95Ta.10680.1.S1_atBJ242691--8e-1At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.4058.40.94Ta.8357.1.S1_atBQ161784--2e+1At5g37780CAM1 (CALMODULIN 1)O.I.H.G.S.X.
0.4058.40.96Ta.8220.1.S1_x_atCD926799--3e-2At5g66330leucine-rich repeat family proteinO.I.H.G.S.X.
0.4058.40.96Ta.13256.2.S1_atCK193207--1e-5At4g24180-O.I.H.G.S.X.
0.3956.10.95Ta.30872.1.S1_atCN011647--2e-2At3g63310glutamate bindingO.I.H.G.S.X.
0.3956.10.94Ta.55.1.S1_x_atAF155217.2starch synthase IIA /// starch synthase IIa-2-3e-11At3g01180AtSS2 (starch synthase 2)O.I.H.G.S.X.
0.3956.10.95Ta.13292.1.S1_s_atCD373872--2e-2At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.3956.10.96Ta.8359.1.S1_s_atBQ172037--5e-1At3g26510octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.3956.10.96Ta.55.2.S1_atU66377.1starch synthase IIa-1-2e-13At3g01180AtSS2 (starch synthase 2)O.I.H.G.S.X.
0.3956.10.96Ta.21020.1.S1_atCD895774--3e+0At3g57710protein kinase family proteinO.I.H.G.S.X.
0.3854.70.95TaAffx.24786.1.S1_atCA712353--4e+0At5g11680unknown proteinO.I.H.G.S.X.
0.3753.00.96Ta.8220.1.S1_atCD926799--3e-2At5g66330leucine-rich repeat family proteinO.I.H.G.S.X.
0.3651.90.95Ta.4811.1.S1_x_atBJ229035--1e-2At1g28590lipase, putativeO.I.H.G.S.X.
0.3549.80.96Ta.13865.1.S1_atAF543316.1MADS box protein-3e-9At5g15800SEP1 (SEPALLATA1)O.I.H.G.S.X.
0.3549.80.96Ta.1316.1.S1_x_atBQ579487--1e+1At5g33355-O.I.H.G.S.X.
0.3448.10.96Ta.27766.2.S1_atCD896218fasciclin-like protein FLA6-1e+1At3g21150zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.3346.90.96TaAffx.3910.2.A1_x_atBJ284892--1e-1At3g57440unknown proteinO.I.H.G.S.X.
0.3244.40.95Ta.1316.1.S1_a_atBQ579487--1e+1At5g33355-O.I.H.G.S.X.
0.3244.40.96TaAffx.3910.2.A1_atBJ284892--1e-1At3g57440unknown proteinO.I.H.G.S.X.
0.3142.70.95Ta.14469.2.A1_a_atCD374109MADS-box transcription factor TaAGL16-2e-5At3g61120AGL13 (AGAMOUS-LIKE 13)O.I.H.G.S.X.
0.3040.90.95Ta.22174.1.S1_x_atCD900641--2e+1At5g17120-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.496.8GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.793.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.291.0GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.190.3GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.190.3GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
1.988.9GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
1.988.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
1.988.9GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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