Co-expression analysis

Gene ID Ta.3932.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g23510: unknown protein (HF=2e+1)
Module size 8 genes
NF 0.32
%ile 51.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.92Ta.3932.1.S1_a_atCA685040--2e+1At5g23510unknown proteinO.I.H.G.S.X.
0.4159.60.92Ta.8631.2.S1_a_atCA635564--5e-9At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.4058.40.94Ta.21273.1.S1_s_atCA615208--4e-1At2g42460meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.3854.70.93Ta.17648.1.S1_s_atCA623067--4e-20At2g46700calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.2735.60.95Ta.22604.1.S1_atCA688890--2e-1At1g34780ATAPRL4 (APR-like 4)O.I.H.G.S.X.
0.2227.10.94Ta.8488.1.S1_a_atCA637893--4e+0At4g12040zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.1922.40.96Ta.5700.2.S1_a_atBE213377--2e-3At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)O.I.H.G.S.X.
0.1517.10.95Ta.8631.1.S1_atCA690636--8e-28At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.999.5GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
14.599.5GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
13.599.5GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.499.3GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
10.099.1GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
9.799.1GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.698.7GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.598.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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