Co-expression analysis

Gene ID	Ta.3869.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g40780: LHT1 (HF=7e-14)
Module size	6 genes
NF	0.52
%ile	78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.85	Ta.3869.1.S1_at	CA674403	-	-	7e-14	At5g40780	LHT1	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.87	Ta.27057.1.S1_at	BT009397.1	-	-	2e+0	At3g02760	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.86	TaAffx.10772.1.A1_s_at	CK213044	-	-	6e+0	At4g28050	TET7 (TETRASPANIN7)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.86	TaAffx.10772.1.A1_at	CK213044	-	-	6e+0	At4g28050	TET7 (TETRASPANIN7)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.85	TaAffx.38571.1.A1_at	BJ218223	-	-	4e+0	At3g47150	F-box family protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.86	Ta.22550.1.A1_at	BQ281632	-	-	6e+0	At3g26960	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
25.0	99.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
24.5	99.8	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
16.8	99.6	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
12.8	99.4	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.6	99.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.5	99.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.8	97.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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