Co-expression analysis

Gene ID	Ta.3834.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g69650: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (HF=3e-1)
Module size	6 genes
NF	0.55
%ile	81.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.95	Ta.3834.1.A1_at	BJ254393	-	-	3e-1	At1g69650	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.13084.1.S1_at	CA744806	-	-	3e-1	At3g13437	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.11963.1.A1_at	BQ171171	-	-	4e+0	At5g60200	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.7890.2.A1_a_at	BQ160858	-	-	4e+0	At5g51451	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	TaAffx.5779.1.S1_at	BJ307256	-	-	1e-1	At1g35365	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.96	Ta.13084.2.S1_at	BG904606	-	-	3e+0	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.1	98.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.4	92.0	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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