Co-expression analysis

Gene ID	Ta.3797.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g11425: unknown protein (HF=2e+1)
Module size	6 genes
NF	0.52
%ile	78.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.97	Ta.3797.3.S1_a_at	CA602105	-	-	2e+1	At5g11425	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.97	Ta.3797.3.S1_x_at	CA602105	-	-	2e+1	At5g11425	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.10203.3.S1_a_at	CA659053	-	-	1e-2	At5g03030	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.12576.2.S1_a_at	BJ300510	-	-	4e+0	At5g62350	invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.4869.1.S1_at	BJ228959	-	-	2e+0	At4g01915	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.2982.1.S1_a_at	AY135021.1	GTP-binding protein	-	3e-37	At1g30580	GTP binding	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.9	99.4	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.6	98.7	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.1	94.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0	94.3	GSM111209	genotype F36 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9	94.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM314268	tissue type: seedling, leaf - rep3	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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