Co-expression analysis

Gene ID Ta.3722.1.S1_at
Gene name histidyl-tRNA synthetase
Homology with ArabidopsisSimilar to At3g02760: ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding (HF=7e-23)
Module size 7 genes
NF 0.61
%ile 86.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.20.98Ta.3722.1.S1_atBJ273362histidyl-tRNA synthetase-7e-23At3g02760ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide bindingO.I.H.G.S.X.
0.6383.10.98TaAffx.12795.1.S1_atCA655454--1e+1At4g16710glycosyltransferase family protein 28O.I.H.G.S.X.
0.6182.00.98Ta.15308.1.S1_atCD927486--3e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.
0.5979.80.98Ta.7226.1.S1_atBJ277021--2e-7At5g27540MIRO1 (Miro-related GTP-ase 1)O.I.H.G.S.X.
0.5779.20.98Ta.555.1.S1_atCA610333--2e-8At3g20630UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14)O.I.H.G.S.X.
0.5072.40.98Ta.14416.2.A1_a_atBJ271618--3e-4At4g31180aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putativeO.I.H.G.S.X.
0.5072.40.98Ta.121.1.S1_atU49387.1adenylosuccinate synthetase-1e-15At3g57610ADSS (ADENYLOSUCCINATE SYNTHASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.299.8GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
12.099.4GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.398.6GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.798.4GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.198.1GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.397.6GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.097.4GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.396.7GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.795.8GSM324484Si- B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.695.6GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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