Co-expression analysis

Gene ID Ta.3598.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At4g36900: RAP2.10 (related to AP2 10) (HF=4e+0)
Module size 41 genes
NF 0.26
%ile 42.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9899.90.94Ta.3598.2.S1_x_atCA611880--4e+0At4g36900RAP2.10 (related to AP2 10)O.I.H.G.S.X.
0.4362.20.96Ta.3474.1.S1_x_atCK205589--9e-3At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4260.90.95Ta.7286.3.S1_x_atCA646766--1e-9At3g56490zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.3651.90.96Ta.3474.1.S1_atCK205589--9e-3At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3651.90.97Ta.7540.2.S1_atBJ320845--4e-6At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.3244.40.98Ta.2848.1.S1_atBQ605815--1e-7At5g64350FKBP12 (FK506-BINDING PROTEIN)O.I.H.G.S.X.
0.3244.40.97TaAffx.4157.1.S1_atCA608260--4e-3At1g17160pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.3142.70.97Ta.3049.2.S1_a_atCA641132--2e-8At2g04940scramblase-relatedO.I.H.G.S.X.
0.3142.70.96Ta.7234.2.S1_atBJ269596--2e-8At2g45010unknown proteinO.I.H.G.S.X.
0.3040.90.96TaAffx.24473.1.S1_s_atCA718991--4e+0At3g18030ATHAL3AO.I.H.G.S.X.
0.2939.20.97Ta.9112.1.S1_atBJ237987--5e-2At1g08370DCP1 (decapping 1)O.I.H.G.S.X.
0.2939.20.96Ta.19240.1.S1_atCA649168--5e+0At2g03780translin family proteinO.I.H.G.S.X.
0.2939.20.98Ta.2848.1.S1_x_atBQ605815--1e-7At5g64350FKBP12 (FK506-BINDING PROTEIN)O.I.H.G.S.X.
0.2839.20.97TaAffx.61230.1.S1_atCK208449--8e-5At5g48160OBE2 (OBERON2)O.I.H.G.S.X.
0.2735.60.96Ta.3004.2.S1_atCA699171--3e-15At1g48490kinaseO.I.H.G.S.X.
0.2735.60.97Ta.25681.1.S1_atAJ614892--3e-2At2g22145-O.I.H.G.S.X.
0.2633.60.96Ta.4542.1.S1_atBQ169211--2e+0At5g47130Bax inhibitor-1 family / BI-1 familyO.I.H.G.S.X.
0.2532.10.95TaAffx.111763.1.S1_s_atCA593546--3e-1At3g42150unknown proteinO.I.H.G.S.X.
0.2532.10.97Ta.13765.1.S1_s_atBJ244434DNA-binding protein S1FA-6e-6At2g37120DNA-binding S1FA family proteinO.I.H.G.S.X.
0.2430.30.97Ta.7853.1.S1_atBQ160800--2e-4At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.
0.2430.30.98Ta.2668.1.S1_atBJ280117--1e-22At4g26840SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)O.I.H.G.S.X.
0.2430.30.95Ta.21252.2.S1_x_atCA664351--1e+0At3g22421F-box family proteinO.I.H.G.S.X.
0.2430.30.97Ta.7540.2.S1_x_atBJ320845--1e-15At3g07220transcriptional activator, putativeO.I.H.G.S.X.
0.2329.00.96Ta.9306.3.S1_x_atCA642778--4e+0At5g16840BPA1 (BINDINGPARTNEROFACD11 1)O.I.H.G.S.X.
0.2329.00.95TaAffx.61855.2.S1_x_atCA614570--4e+0At3g44150unknown proteinO.I.H.G.S.X.
0.2329.00.98Ta.14227.1.S1_atCD869993--1e-7At5g35680eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putativeO.I.H.G.S.X.
0.2329.00.96Ta.16668.1.S1_x_atCK212492--2e+0At3g54826-O.I.H.G.S.X.
0.2227.10.96Ta.4396.2.S1_a_atCA639002--4e-20At5g51220ubiquinol-cytochrome C chaperone family proteinO.I.H.G.S.X.
0.2227.10.96Ta.9306.2.S1_x_atBE493280--6e+0At5g46870RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2125.50.97Ta.2343.1.S1_x_atCD879483--4e-41At5g08290YLS8O.I.H.G.S.X.
0.2024.00.97Ta.22956.1.S1_a_atCK154028--1e-1At5g03345-O.I.H.G.S.X.
0.2024.00.98Ta.23051.1.A1_a_atCK154103--4e-19At3g47930ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)O.I.H.G.S.X.
0.1922.40.97Ta.28321.1.S1_a_atCK211481Ubiquitin-conjugating enzyme-2e-25At3g08690UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)O.I.H.G.S.X.
0.1922.40.97Ta.8239.1.S1_a_atCN013171--2e+0At3g04780-O.I.H.G.S.X.
0.1821.00.98TaAffx.108368.1.S1_x_atCA689117--2e-22At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)O.I.H.G.S.X.
0.1821.00.99Ta.1532.1.S1_a_atBJ231467eukaryotic translation initiation factor 5A3-2e-6At1g26630FBR12 (FUMONISIN B1-RESISTANT12)O.I.H.G.S.X.
0.1821.00.98Ta.27117.6.S1_x_atBJ262049--1e-12At3g0852060S ribosomal protein L41 (RPL41D)O.I.H.G.S.X.
0.1821.00.97Ta.9783.3.S1_x_atBJ285979--4e+0At2g21465-O.I.H.G.S.X.
0.1517.10.96TaAffx.61855.2.S1_atCA614570--4e+0At3g44150unknown proteinO.I.H.G.S.X.
0.1112.40.98Ta.3227.2.S1_x_atCK198384alternative splicing regulator-1e-17At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.
0.1112.40.97Ta.794.1.S1_x_atCK171366QM-1e-57At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.0GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.089.7GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
2.089.7GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.089.7GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.089.7GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.089.7GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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