Co-expression analysis

Gene ID Ta.3597.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g12370: SEC10 (EXOCYST COMPLEX COMPONENT SEC10) (HF=1e-6)
Module size 6 genes
NF 0.61
%ile 86.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.80.97Ta.3597.1.S1_atBQ166709--1e-6At5g12370SEC10 (EXOCYST COMPLEX COMPONENT SEC10)O.I.H.G.S.X.
0.7389.10.97Ta.5344.1.A1_atCA703187--1e+1At4g11653RALFL29 (RALF-LIKE 29)O.I.H.G.S.X.
0.7389.10.97Ta.5344.1.A1_x_atCA703187--1e+1At4g11653RALFL29 (RALF-LIKE 29)O.I.H.G.S.X.
0.6081.00.97Ta.7456.2.S1_atBJ319888--3e-4At3g16480MPPalpha (mitochondrial processing peptidase alpha subunit)O.I.H.G.S.X.
0.4464.50.97Ta.20993.1.S1_atCK160629--1e+1At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)O.I.H.G.S.X.
0.3549.80.97Ta.5352.1.A1_atCK206595--2e-13At2g35630MOR1 (MICROTUBULE ORGANIZATION 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.699.4GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.099.1GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
9.099.0GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.798.7GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.298.5GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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