Co-expression analysis

Gene ID Ta.359.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g01150: PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1) (HF=3e-7)
Module size 6 genes
NF 0.73
%ile 94.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.98Ta.359.1.S1_a_atBJ263340--3e-7At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.9198.20.97Ta.359.2.S1_x_atCD863544--3e-15At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.8092.20.97Ta.359.1.S1_x_atBJ263340--3e-7At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.6786.30.98Ta.359.3.S1_x_atCA685131--2e-1At3g28140calmodulin-binding proteinO.I.H.G.S.X.
0.6182.00.97Ta.181.1.S1_atAB052133.1casein kinase II alpha-4e-55At2g23080casein kinase II alpha chain, putativeO.I.H.G.S.X.
0.4767.90.97Ta.7345.1.S1_atCK158442--1e-11At3g62140unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.9GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.297.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM139912Anther pre-meiosis rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.096.3GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.996.1GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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