Co-expression analysis

Gene ID	Ta.3584.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g25102: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.57
%ile	82.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.97	Ta.3584.2.S1_a_at	CA601548	-	-	1e+0	At5g25102	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.1931.2.S1_a_at	CA610152	-	-	1e+0	At3g29720	transferase-related	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.114677.1.S1_at	CA659671	-	-	1e-8	At2g41620	nucleoporin interacting component family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	TaAffx.81795.1.S1_at	CA644276	-	-	2e-4	At5g57320	villin, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.25582.3.S1_a_at	CA721040	-	-	3e+0	At3g10580	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	TaAffx.82941.1.S1_s_at	CA664642	-	-	2e-8	At5g51660	CPSF160	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.1	98.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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