Co-expression analysis

Gene ID Ta.3559.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g15080: LPP2 (LIPID PHOSPHATE PHOSPHATASE 2) (HF=3e-9)
Module size 11 genes
NF 0.31
%ile 50.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8794.20.97Ta.3559.1.S1_atBE213357--3e-9At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)O.I.H.G.S.X.
0.4260.90.97Ta.7540.2.S1_atBJ320845--4e-6At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.3549.80.97TaAffx.113600.1.S1_s_atCA608828--6e+0At3g27160GHS1 (GLUCOSE HYPERSENSITIVE 1)O.I.H.G.S.X.
0.2430.30.97Ta.7286.3.S1_a_atCA646766--1e-9At3g56490zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.2329.00.98Ta.23742.1.S1_atCA668797--5e-66At5g45550mob1/phocein family proteinO.I.H.G.S.X.
0.2125.50.98Ta.8152.1.S1_atCD871046--4e-22At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)O.I.H.G.S.X.
0.1821.00.97Ta.1602.1.S1_x_atCA721317--2e+0At5g55200co-chaperone grpE protein, putativeO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.499.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
11.599.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.999.1GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
6.698.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.897.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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