Co-expression analysis

Gene ID	Ta.3504.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g16150: L-asparaginase, putative / L-asparagine amidohydrolase, putative (HF=1e+0)
Module size	7 genes
NF	0.21
%ile	35.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	78.6	0.72	Ta.3504.1.A1_at	CK163751	-	-	1e+0	At3g16150	L-asparaginase, putative / L-asparagine amidohydrolase, putative	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.83	Ta.25927.1.A1_x_at	CD454513	-	-	5e+0	At2g36916	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.79	TaAffx.12607.1.S1_at	BE429383	-	-	2e-1	At1g45191	-	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.82	Ta.25927.1.A1_at	CD454513	-	-	5e+0	At2g36916	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.82	Ta.14181.1.S1_x_at	BJ244730	-	-	4e+0	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.74	TaAffx.131750.2.S1_at	CA597878	-	-	3e+0	At2g41840	40S ribosomal protein S2 (RPS2C)	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.76	TaAffx.76521.1.S1_at	CD881201	-	-	1e+0	At2g22241	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.6	99.7	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
20.4	99.7	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
19.2	99.7	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
18.6	99.7	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
17.1	99.6	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
16.7	99.6	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
15.0	99.6	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.1	99.0	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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