Co-expression analysis

Gene ID	Ta.3478.3.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g69670: CUL3B (CULLIN 3B) (HF=2e-11)
Module size	6 genes
NF	0.51
%ile	77.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.95	Ta.3478.3.S1_x_at	CA637826	-	-	2e-11	At1g69670	CUL3B (CULLIN 3B)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	Ta.12647.3.S1_x_at	CA654695	-	-	1e+0	At2g33220	-	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	TaAffx.34241.2.S1_x_at	CA722326	-	-	4e+0	At5g51960	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	TaAffx.34241.2.S1_at	CA722326	-	-	4e+0	At5g51960	-	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.95	Ta.14479.3.S1_x_at	CA630294	-	-	7e-18	At2g05830	eukaryotic translation initiation factor 2B family protein / eIF-2B family protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.95	TaAffx.25126.1.S1_at	CA705922	-	-	3e+0	At3g17460	PHD finger family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.0	99.1	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.4	98.6	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.4	97.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.2	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.0	94.3	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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