Co-expression analysis

Gene ID	Ta.3322.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At4g18030: dehydration-responsive family protein (HF=2e-5)
Module size	7 genes
NF	0.23
%ile	39.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	89.8	0.95	Ta.3322.3.S1_a_at	CA649562	-	-	2e-5	At4g18030	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.94	TaAffx.47952.1.A1_at	BJ230741	-	-	1e-1	At4g38420	sks9 (SKU5 Similar 9)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	Ta.3322.1.S1_s_at	CK208679	-	-	4e-50	At1g26850	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.96	TaAffx.56884.1.S1_at	CA641860	-	-	1e+1	At5g48280	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.95	Ta.6945.1.A1_at	BJ319268	-	-	3e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.95	Ta.10065.1.S1_at	CD937007	-	-	1e+0	At3g30725	AtGDU6 (Arabidopsis thaliana GLUTAMINE DUMPER 6)	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.95	Ta.9117.1.A1_a_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	98.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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