Co-expression analysis

Gene ID Ta.3219.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g47870: unknown protein (HF=3e-5)
Module size 8 genes
NF 0.41
%ile 65.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.40.96Ta.3219.1.S1_atCD939114--3e-5At5g47870unknown proteinO.I.H.G.S.X.
0.5576.80.96Ta.13292.1.S1_s_atCD373872--2e-2At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.4464.50.96Ta.20658.1.S1_x_atBQ236450--4e-1At3g06130heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3956.10.96Ta.14029.1.S1_atBQ804699--3e+0At3g01230unknown proteinO.I.H.G.S.X.
0.3753.00.96Ta.28003.2.S1_a_atBJ321671--4e+0At4g39675unknown proteinO.I.H.G.S.X.
0.3651.90.97Ta.2870.2.S1_atBJ284170--3e-31At3g17820ATGSKB6O.I.H.G.S.X.
0.3040.90.96Ta.28003.2.S1_x_atBJ321671--4e+0At4g39675unknown proteinO.I.H.G.S.X.
0.2939.20.97Ta.20658.1.S1_a_atBQ236450--4e-1At3g06130heavy-metal-associated domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.199.7GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
15.599.6GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
12.899.4GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM138175genotype A81 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.692.9GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.391.5GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.291.0GSM111197genotype J15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.291.0GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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