Co-expression analysis

Gene ID	Ta.3160.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g10870: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.52
%ile	78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.89	Ta.3160.1.S1_at	BJ223960	-	-	5e+0	At4g10870	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.90	Ta.19150.1.S1_x_at	CA642565	-	-	2e+1	At5g24580	copper-binding family protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.88	Ta.24723.1.S1_x_at	CA667447	-	-	2e+0	At3g05950	germin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.89	Ta.3118.1.S1_at	BE515437	-	-	5e-4	At1g27140	ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.90	Ta.27750.1.S1_at	CD373503	pSBGer3 protein	-	1e+1	At4g38270	GAUT3 (Galacturonosyltransferase 3)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.88	Ta.8955.1.S1_at	X85227.1	pox1 protein	-	2e-1	At5g05340	peroxidase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.9	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
12.1	99.4	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
11.9	99.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250918	TcLr34_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250894	TcLr34_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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