Co-expression analysis

Gene ID Ta.30790.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g12665: - (HF=1e-1)
Module size 6 genes
NF 0.66
%ile 90.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.92Ta.30790.1.S1_atCK195596--1e-1At1g12665-O.I.H.G.S.X.
0.8092.20.92Ta.30790.2.S1_atCD919145--2e-1At3g58850PAR2 (PHY RAPIDLY REGULATED 2)O.I.H.G.S.X.
0.8092.20.92Ta.30790.1.S1_a_atCK195596--1e-1At1g12665-O.I.H.G.S.X.
0.7389.10.92TaAffx.8112.2.S1_s_atCA723801--1e+1At3g13224RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.6182.00.91TaAffx.8112.1.S1_x_atBQ801783--2e+1At4g32930unknown proteinO.I.H.G.S.X.
0.1922.40.92Ta.26378.1.A1_s_atCD490910--2e+0At2g18530protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.699.7GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
16.599.6GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
13.799.5GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
11.499.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.797.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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