Co-expression analysis

Gene ID Ta.30760.1.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At4g24910: unknown protein (HF=3e+1)
Module size 23 genes
NF 0.58
%ile 84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.99Ta.30760.1.A1_x_atCK198315--3e+1At4g24910unknown proteinO.I.H.G.S.X.
0.7389.10.99Ta.659.5.S1_atCD878955--0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.6886.50.99Ta.30787.1.S1_atBQ802485--6e-38At1g0969060S ribosomal protein L21 (RPL21C)O.I.H.G.S.X.
0.6886.50.99Ta.28308.1.S1_atBJ217291--2e-15At3g2890060S ribosomal protein L34 (RPL34C)O.I.H.G.S.X.
0.6786.30.99Ta.1335.1.S1_atBQ842066--4e-85At5g0296040S ribosomal protein S23 (RPS23B)O.I.H.G.S.X.
0.6483.60.99Ta.28257.1.S1_x_atCK210991--6e-19At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.6383.10.99Ta.6294.1.S1_s_atCK209216--6e-1At1g23750DNA-binding protein-relatedO.I.H.G.S.X.
0.6282.30.99Ta.1335.1.S1_x_atBQ842066--4e-85At5g0296040S ribosomal protein S23 (RPS23B)O.I.H.G.S.X.
0.6081.00.99Ta.23429.1.S1_atCK203896Ribosomal protein S7-5e-5At1g4883040S ribosomal protein S7 (RPS7A)O.I.H.G.S.X.
0.5979.80.99Ta.14635.2.S1_a_atBJ225605Ribosomal Pr 117-1e-75At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.5879.20.99TaAffx.128418.67.S1_s_atBJ243404--2e-17At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.5879.20.99Ta.23202.1.S1_x_atCA664020Ribosomal protein P1-4e-1At5g2451060s acidic ribosomal protein P1, putativeO.I.H.G.S.X.
0.5879.20.99Ta.1289.1.S1_s_atBJ310874--2e-40At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.5779.20.99Ta.27765.4.S1_x_atBJ231799Ribosomal protein L39-3e-20At4g3198560S ribosomal protein L39 (RPL39C)O.I.H.G.S.X.
0.5779.20.99Ta.22961.1.S1_a_atBJ299675--3e-20At2g3206040S ribosomal protein S12 (RPS12C)O.I.H.G.S.X.
0.5779.20.99Ta.27765.3.S1_x_atCD925325Ribosomal protein L39-7e-15At4g3198560S ribosomal protein L39 (RPL39C)O.I.H.G.S.X.
0.5576.80.99Ta.1518.2.S1_x_atBJ279477--6e-4At1g7427060S ribosomal protein L35a (RPL35aC)O.I.H.G.S.X.
0.5475.50.99Ta.13683.1.S1_atCD893419--7e-25At2g1974060S ribosomal protein L31 (RPL31A)O.I.H.G.S.X.
0.5273.70.99Ta.28341.1.S1_atBJ272630--5e-1At3g0423040S ribosomal protein S16 (RPS16B)O.I.H.G.S.X.
0.5173.00.99Ta.14324.3.S1_x_atBJ228983--1e-3At5g27700structural constituent of ribosomeO.I.H.G.S.X.
0.5173.00.99Ta.28739.1.S1_x_atBJ246370--8e-2At3g07230wound-responsive protein-relatedO.I.H.G.S.X.
0.4362.20.99Ta.27377.2.S1_atBJ320612--2e-64At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)O.I.H.G.S.X.
0.3753.00.99Ta.24826.3.S1_x_atBJ263115--8e-34At2g3448060S ribosomal protein L18A (RPL18aB)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.4GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
3.996.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM250906TcLr34_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM250912TcLr34_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.492.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.391.5GSM250918TcLr34_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.391.5GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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