Co-expression analysis

Gene ID Ta.30759.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g19450: integral membrane protein, putative / sugar transporter family protein (HF=1e-2)
Module size 11 genes
NF 0.43
%ile 68.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.97Ta.30759.1.S1_x_atCD911744--1e-2At1g19450integral membrane protein, putative / sugar transporter family proteinO.I.H.G.S.X.
0.5979.80.97Ta.3888.1.S1_a_atCK214647--8e-5At5g54430universal stress protein (USP) family proteinO.I.H.G.S.X.
0.5979.80.97Ta.9077.1.S1_x_atCK167537--3e-19At1g77670aminotransferase class I and II family proteinO.I.H.G.S.X.
0.4767.90.98Ta.12123.2.S1_x_atCA638381--3e+0At1g17730VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)O.I.H.G.S.X.
0.4565.20.98Ta.18932.1.A1_x_atCA639741--1e-19At5g42790PAF1O.I.H.G.S.X.
0.3651.90.98Ta.12123.1.S1_atBQ171638--7e-32At5g56280CSN6AO.I.H.G.S.X.
0.3549.80.98Ta.5773.1.S1_atBJ237756--7e-53At2g33120SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)O.I.H.G.S.X.
0.3346.90.97Ta.10108.2.A1_a_atCA684446--2e-3At5g43150unknown proteinO.I.H.G.S.X.
0.2939.20.99Ta.18932.3.S1_atCK208434--2e-4At1g47250PAF2O.I.H.G.S.X.
0.2735.60.98Ta.1531.2.S1_x_atBJ265522--3e+0At5g39230transcription initiation factor-relatedO.I.H.G.S.X.
0.2735.60.99Ta.9090.1.S1_atBQ170299--2e+0At2g30410KIS (KIESEL)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.7GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.398.6GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM314257tissue type: germinating seed, embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.793.3GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage