Co-expression analysis

Gene ID Ta.30743.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g39990: EIF2 (HF=7e-1)
Module size 32 genes
NF 0.45
%ile 70.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.99Ta.30743.1.S1_atCK169502--7e-1At2g39990EIF2O.I.H.G.S.X.
0.6483.60.99Ta.28549.2.S1_a_atBJ299871ribosomal protein L7-9e-34At2g4412060S ribosomal protein L7 (RPL7C)O.I.H.G.S.X.
0.6182.00.98Ta.28743.1.S1_atBJ294264--5e-23At3g49010ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1)O.I.H.G.S.X.
0.6081.00.99Ta.789.1.S1_a_atD13147.1elongation factor 1 beta'-7e-4At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)O.I.H.G.S.X.
0.5678.60.99Ta.30628.2.S1_x_atCK153899Ribosomal protein L36-3e-36At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.5678.60.99Ta.22849.1.S1_x_atBJ274981--2e-68At3g5258040S ribosomal protein S14 (RPS14C)O.I.H.G.S.X.
0.5678.60.99Ta.1289.3.S1_atBJ254846--8e-34At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.5678.60.99Ta.28291.2.S1_x_atBJ308939--5e-42At5g3974060S ribosomal protein L5 (RPL5B)O.I.H.G.S.X.
0.5475.50.99Ta.5670.1.S1_atCK154517--1e-17At4g33250EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K)O.I.H.G.S.X.
0.5072.40.99Ta.7180.1.S1_x_atBJ297398--3e-28At3g1358060S ribosomal protein L7 (RPL7D)O.I.H.G.S.X.
0.5072.40.99Ta.27785.1.S1_a_atBQ804429--4e-33At5g5924040S ribosomal protein S8 (RPS8B)O.I.H.G.S.X.
0.4969.70.98Ta.22874.1.S1_x_atBJ227550--1e-25At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.
0.4969.70.98Ta.14445.1.A1_x_atBJ243115--2e+1At5g63065-O.I.H.G.S.X.
0.4666.80.99Ta.824.1.S1_a_atBJ263208Ribosomal protein L10A-8e-49At5g2244060S ribosomal protein L10A (RPL10aC)O.I.H.G.S.X.
0.4666.80.99Ta.14419.1.S1_atCD865362--7e-71At1g07770RPS15A (ribosomal protein s15a)O.I.H.G.S.X.
0.4464.50.98Ta.28710.1.S1_x_atBQ609635--3e-14At1g7427060S ribosomal protein L35a (RPL35aC)O.I.H.G.S.X.
0.4464.50.99Ta.15265.1.S1_atAY347532.1--3e-124At1g43170ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)O.I.H.G.S.X.
0.4362.20.98Ta.24130.2.S1_x_atBQ80714560S ribosomal protein L15-6e-41At4g1739060S ribosomal protein L15 (RPL15B)O.I.H.G.S.X.
0.4260.90.99Ta.28291.4.S1_x_atBJ297604--1e-54At3g25520ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5)O.I.H.G.S.X.
0.4058.40.99Ta.28291.3.S1_x_atBJ318761--1e-16At3g25520ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5)O.I.H.G.S.X.
0.4058.40.99Ta.28338.1.S1_atBJ209481--1e-19At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.3956.10.99Ta.27765.3.S1_atCD925325Ribosomal protein L39-7e-15At4g3198560S ribosomal protein L39 (RPL39C)O.I.H.G.S.X.
0.3956.10.99Ta.2739.4.S1_x_atBJ321613Ribosomal protein L19-3e-45At3g1678060S ribosomal protein L19 (RPL19B)O.I.H.G.S.X.
0.3854.70.99Ta.966.1.S1_s_atBQ483970--7e-22At2g3206040S ribosomal protein S12 (RPS12C)O.I.H.G.S.X.
0.3854.70.98Ta.1289.3.S1_x_atBJ254846--8e-34At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.3854.70.98Ta.805.1.S1_atBJ220913--9e-15At3g05590RPL18 (RIBOSOMAL PROTEIN L18)O.I.H.G.S.X.
0.3753.00.99Ta.14635.2.S1_a_atBJ225605Ribosomal Pr 117-1e-75At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.3448.10.99Ta.28308.1.S1_atBJ217291--2e-15At3g2890060S ribosomal protein L34 (RPL34C)O.I.H.G.S.X.
0.3448.10.99Ta.1335.2.S1_x_atCD454702--2e-86At5g0296040S ribosomal protein S23 (RPS23B)O.I.H.G.S.X.
0.3448.10.99Ta.27765.2.S1_x_atBJ228881Ribosomal protein L39-6e-15At4g3198560S ribosomal protein L39 (RPL39C)O.I.H.G.S.X.
0.3346.90.99Ta.2605.2.S1_atBJ226329--1e-16At3g4737040S ribosomal protein S20 (RPS20B)O.I.H.G.S.X.
0.3142.70.98Ta.22683.2.S1_atBJ218386--1e-32At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.3GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.492.0GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.391.5GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
2.391.5GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage