Co-expression analysis

Gene ID	Ta.30735.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g76680: OPR1 (HF=1e-17)
Module size	6 genes
NF	0.55
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.86	Ta.30735.1.S1_at	CN009367	-	-	1e-17	At1g76680	OPR1	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.90	Ta.19150.1.S1_x_at	CA642565	-	-	2e+1	At5g24580	copper-binding family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.86	Ta.21267.1.S1_s_at	CA694095	-	-	5e+0	At5g60680	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.88	Ta.24723.1.S1_x_at	CA667447	-	-	2e+0	At3g05950	germin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.89	Ta.3118.1.S1_at	BE515437	-	-	5e-4	At1g27140	ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.89	Ta.27750.1.S1_at	CD373503	pSBGer3 protein	-	1e+1	At4g38270	GAUT3 (Galacturonosyltransferase 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.0	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
12.2	99.4	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
11.3	99.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3	98.6	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM250918	TcLr34_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250894	TcLr34_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.8	93.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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