Co-expression analysis

Gene ID	Ta.30706.1.S1_at
Gene name	expansin EXPA6
Homology with Arabidopsis	Similar to At2g03090: ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) (HF=8e+0)
Module size	15 genes
NF	0.59
%ile	85.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.90	Ta.30706.1.S1_at	AY543532.1	expansin EXPA6	-	8e+0	At2g03090	ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)	O.I.	H.G.	S.X.	Please select
0.76	90.1	0.90	TaAffx.111143.1.S1_at	CA647259	-	-	8e+0	At5g13910	LEP (LEAFY PETIOLE)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.93	Ta.20986.1.S1_x_at	CA641147	-	-	4e+0	At2g05440	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.90	TaAffx.65026.1.A1_at	BJ265948	-	-	4e+0	At5g17080	cathepsin-related	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	Ta.27235.1.S1_s_at	BT009580.1	-	-	3e+1	At5g15320	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.93	TaAffx.110993.1.A1_at	BJ284006	-	-	1e+0	At5g26740	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.90	Ta.13937.1.A1_at	BQ744333	-	-	5e+0	At1g26480	GRF12 (GENERAL REGULATORY FACTOR 12)	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.91	Ta.14311.1.A1_at	BU099716	-	-	1e-3	At2g41660	MIZ1 (mizu-kussei 1)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.91	Ta.1708.1.A1_at	BE445919	-	-	3e-1	At5g50430	UBC33 (ubiquitin-conjugating enzyme 33)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.92	Ta.16452.1.S1_at	CA606615	-	-	3e+0	At5g20790	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.92	Ta.18721.1.S1_at	CA641200	-	-	9e-1	At3g46080	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.92	TaAffx.56637.1.S1_at	CK215319	-	-	6e+0	At3g50260	CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.91	Ta.19244.1.S1_a_at	CA649219	-	-	1e+0	At3g59960	ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4)	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.94	Ta.19141.1.S1_at	CA647806	-	-	1e-1	At5g24120	SIGE (SIGMA FACTOR E)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.92	TaAffx.113389.1.S1_x_at	CA609333	-	-	2e+1	At5g05657	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.7	99.3	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
11.4	99.3	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
7.5	98.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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