Co-expression analysis

Gene ID	Ta.30659.1.S1_at
Gene name	ALMT1
Homology with Arabidopsis	Similar to At1g08440: - (HF=8e-7)
Module size	6 genes
NF	0.07
%ile	17.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.81	Ta.30659.1.S1_at	AB081803.1	ALMT1	-	8e-7	At1g08440	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.83	Ta.20771.1.S1_at	AY543542.1	expansin EXPB8	-	6e-1	At3g48240	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.81	Ta.19461.1.S1_at	CA652109	-	-	9e-1	At3g26900	shikimate kinase family protein	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.88	Ta.14492.1.S1_at	CK199539	-	-	2e+0	At5g11660	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.82	Ta.1585.1.S1_at	BE404512	-	-	4e+0	At3g16770	ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.81	Ta.25483.1.S1_at	CD452469	-	-	2e-2	At4g30390	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.2	98.1	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.2	96.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.8	96.0	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.6	95.6	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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