Co-expression analysis

Gene ID Ta.30653.1.S1_at
Gene name hypothetical LOC543043
Homology with ArabidopsisSimilar to At2g33870: ArRABA1h (Arabidopsis Rab GTPase homolog A1h) (HF=9e-2)
Module size 7 genes
NF 0.34
%ile 55.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.87Ta.30653.1.S1_atAJ606023.1hypothetical LOC543043-9e-2At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)O.I.H.G.S.X.
0.6081.00.91Ta.4480.2.S1_atCA599963--1e+0At4g36410UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)O.I.H.G.S.X.
0.5072.40.90TaAffx.119572.1.S1_atBJ267765--4e+0At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.
0.4058.40.94Ta.6956.2.S1_x_atBJ304062--5e+0At5g36130cytochrome P450 familyO.I.H.G.S.X.
0.2939.20.91Ta.6956.2.S1_atBJ304062--5e+0At5g36130cytochrome P450 familyO.I.H.G.S.X.
0.2939.20.91TaAffx.113398.1.S1_atCA613502--3e-4At1g18420-O.I.H.G.S.X.
0.1112.40.91Ta.28561.2.S1_atBJ244783--8e-1At2g39520unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.999.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.998.4GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM138178genotype A88 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.495.2GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.395.0GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.294.8GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.492.0GSM138175genotype A81 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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