Co-expression analysis

Gene ID	Ta.30642.1.S1_at
Gene name	hypothetical LOC543029
Homology with Arabidopsis	Similar to At5g10200: binding (HF=2e-30)
Module size	6 genes
NF	0.55
%ile	81.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.94	Ta.30642.1.S1_at	BQ805349	hypothetical LOC543029	-	2e-30	At5g10200	binding	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.6945.2.S1_at	BJ312841	-	-	9e-3	At1g28340	AtRLP4 (Receptor Like Protein 4)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	Ta.4559.2.S1_a_at	BJ267794	-	-	2e+0	At4g01590	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	TaAffx.5553.1.S1_x_at	CA707033	-	-	4e+0	At3g43420	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.4559.2.S1_at	BJ267794	-	-	2e+0	At4g01590	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.94	Ta.834.3.S1_a_at	BQ608659	-	-	1e+0	At5g05000	TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
35.7	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
7.3	98.6	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.9	98.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.7	97.9	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.5	97.8	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.9	97.3	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.2	94.8	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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