Co-expression analysis

Gene ID	Ta.30600.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g57500: unknown protein (HF=4e+0)
Module size	8 genes
NF	0.34
%ile	54.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	94.4	0.79	Ta.30600.1.S1_at	BJ291893	-	-	4e+0	At3g57500	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.88	Ta.25779.1.S1_at	CD373896	-	-	7e+0	At5g03010	kelch repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.87	Ta.21253.1.S1_at	CA609166	-	-	7e-2	At1g28170	sulfotransferase family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.86	Ta.25712.1.S1_at	CD374009	-	-	1e-1	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.87	TaAffx.113545.1.S1_at	CD871079	-	-	2e+0	At3g27350	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.85	TaAffx.38100.1.A1_at	BJ250181	-	-	4e+0	At3g01185	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.87	TaAffx.36368.1.S1_at	CA719008	-	-	7e+0	At4g13261	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.88	Ta.4244.1.A1_at	BJ262725	-	-	1e+0	At3g23280	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.7	98.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9	94.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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