Co-expression analysis

Gene ID	Ta.30590.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g15460: glycine-rich protein (HF=2e+0)
Module size	7 genes
NF	0.52
%ile	77.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.90	Ta.30590.1.A1_at	CK205601	-	-	2e+0	At4g15460	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.27912.1.A1_at	BJ214600	-	-	2e-7	At3g45090	2-phosphoglycerate kinase-related	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.9146.2.S1_a_at	BJ217637	-	-	1e-11	At1g74960	FAB1 (FATTY ACID BIOSYNTHESIS 1)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.93	TaAffx.55626.1.S1_at	BJ276003	-	-	3e-2	At1g11000	MLO4 (MILDEW RESISTANCE LOCUS O 4)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.9146.2.S1_at	BJ217637	-	-	1e-11	At1g74960	FAB1 (FATTY ACID BIOSYNTHESIS 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.15103.1.S1_at	CA690029	-	-	6e-1	At4g25140	OLEO1 (OLEOSIN 1)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.91	Ta.11541.1.S1_at	BQ170307	-	-	4e-1	At1g49800	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.9	99.8	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
29.5	99.8	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
29.1	99.8	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.9	96.1	GSM111249	genotype F87 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5	95.4	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM111229	genotype B65 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9	94.0	GSM111223	genotype H5 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.8	93.6	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage