Co-expression analysis

Gene ID	Ta.30531.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g18470: unknown protein (HF=2e+0)
Module size	27 genes
NF	0.51
%ile	77.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	98.7	0.91	Ta.30531.1.A1_at	CK196859	-	-	2e+0	At3g18470	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	Ta.27820.1.S1_at	CD864464	-	-	1e+0	At1g72230	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.66	84.1	0.96	Ta.30526.1.A1_at	BJ223529	-	-	5e+0	At1g34910	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.97	TaAffx.86713.1.S1_at	CA602179	-	-	4e+0	At5g47170	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.96	TaAffx.86264.1.S1_s_at	CA723627	-	-	1e+1	At3g19140	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.62	82.3	0.95	Ta.1751.3.S1_x_at	CK164354	-	-	3e+0	At5g26060	S1 self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.62	82.3	0.91	Ta.5286.1.S1_at	BJ280150	-	-	3e+0	At3g20850	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.94	Ta.9001.1.S1_at	CA646400	-	-	5e+0	At3g49270	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.1751.2.S1_at	CA611575	-	-	1e-2	At2g46160	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.16845.1.S1_at	CA613695	-	-	6e+0	At1g34910	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.96	Ta.1653.1.S1_at	BE443458	-	-	4e+0	At5g52060	ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1)	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.96	TaAffx.37427.1.A1_at	BJ284979	-	-	3e-1	At5g64667	IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	Ta.1751.1.S1_x_at	CA645292	-	-	1e-1	At3g22800	leucine-rich repeat family protein / extensin family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.13552.1.A1_at	CD879174	-	-	1e+0	At1g77370	glutaredoxin, putative	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.92	Ta.1751.2.S1_x_at	CA611575	-	-	1e-2	At2g46160	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.96	TaAffx.29848.1.S1_at	CA741924	-	-	5e+0	At2g07340	prefoldin-related KE2 family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	Ta.25473.1.S1_at	CD452806	-	-	4e-1	At2g06050	OPR3 (OPDA-REDUCTASE 3)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.97	Ta.16845.2.S1_x_at	CA653144	-	-	1e+1	At5g44610	MAP18 (Microtubule-associated Protein 18)	O.I.	H.G.	S.X.	Please select
0.51	73.0	0.94	Ta.26183.1.A1_at	CD452591	-	-	9e-15	At2g24630	ATCSLC08	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.91	Ta.1945.1.S1_at	BE471093	-	-	2e-1	At2g20453	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.96	Ta.1818.1.S1_at	CK212587	-	-	5e+0	At3g47710	bHLH family protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.96	Ta.8147.1.S1_at	BJ279889	-	-	9e-1	At5g20340	BG5 (beta-1,3-glucanase 5)	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.94	TaAffx.113829.1.S1_at	CA604276	-	-	2e+0	At5g26848	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.96	Ta.13153.1.S1_at	BQ294913	-	-	1e+0	At5g05060	-	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.96	TaAffx.51582.1.S1_s_at	CA723376	-	-	2e-1	At5g53970	aminotransferase, putative	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.94	Ta.21158.1.S1_at	CA645154	-	-	3e-5	At1g76680	OPR1	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.96	Ta.27008.1.S1_at	CD490455	-	-	3e-2	At1g02335	GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.2	99.7	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
14.7	99.5	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
14.3	99.5	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
13.7	99.5	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
12.2	99.4	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
11.4	99.3	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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