Co-expression analysis

Gene ID	Ta.30520.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g55360: unknown protein (HF=8e-20)
Module size	6 genes
NF	0.02
%ile	7.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.90	Ta.30520.1.S1_at	CA635767	-	-	8e-20	At1g55360	unknown protein	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.96	Ta.14346.1.A1_at	BQ236769	-	-	4e+0	At1g76180	ERD14 (EARLY RESPONSE TO DEHYDRATION 14)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.97	Ta.3285.1.S1_at	BQ905252	-	-	2e-10	At3g55000	TON1A (TONNEAU 1)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.96	TaAffx.132784.1.A1_at	BQ235909	-	-	1e+0	At5g38720	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.96	Ta.3168.1.S1_at	CD868850	-	-	4e-5	At2g25670	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.96	Ta.9231.2.S1_x_at	BE419141	-	-	2e-8	At2g19750	40S ribosomal protein S30 (RPS30A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.8	98.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.2	97.5	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM138205	genotype H8 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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